Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG01361	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CLM	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG01361	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG01361	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0074	CLM	AMR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG01361	hp2	a0001	a0001c0001	a0001c0001t0023	a0001c0001t0023g0114	CLM	AMR	A1CF	chr10	50794409	50890627
A2M_chr12_9062708_9120919	HG01361	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0007	CLM	AMR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG01361	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0169	CLM	AMR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG01361	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0003	CLM	AMR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG01361	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0024	CLM	AMR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG01361	hp1	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0199	CLM	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG01361	hp2	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0047	CLM	AMR	A4GALT	chr22	42687121	42725870
AAAS_chr12_53302460_53326610	HG01361	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0083	CLM	AMR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG01361	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0159	CLM	AMR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG01361	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0266	CLM	AMR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG01361	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0272	CLM	AMR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG01361	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	CLM	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG01361	hp2	a0001	a0001c0001	a0001c0001t0016	a0001c0001t0016g0100	CLM	AMR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG01361	hp1	a0002	a0002c0003	a0002c0003t0003	a0002c0003t0003g0004	CLM	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG01361	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0094	CLM	AMR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG01361	hp1	a0001	a0001c0001	a0001c0001t0010	a0001c0001t0010g0083	CLM	AMR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG01361	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0159	CLM	AMR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG01361	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0075	CLM	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG01361	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0090	CLM	AMR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG01361	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CLM	AMR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG01361	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0136	CLM	AMR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG01361	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0327	CLM	AMR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG01361	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0153	CLM	AMR	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG01361	hp1	a0001	a0001c0001	a0001c0001t0092	a0001c0001t0092g0164	CLM	AMR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG01361	hp2	a0002	a0002c0002	a0002c0002t0115	a0002c0002t0115g0180	CLM	AMR	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG01361	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0035	CLM	AMR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG01361	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0249	CLM	AMR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG01361	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG01361	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CLM	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG01361	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG01361	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG01361	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0148	CLM	AMR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG01361	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	CLM	AMR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG01361	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	CLM	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG01361	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG01361	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0068	CLM	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG01361	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0184	CLM	AMR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG01361	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0009	CLM	AMR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG01361	hp2	a0001	a0001c0002	a0001c0002t0015	a0001c0002t0015g0090	CLM	AMR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG01361	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	CLM	AMR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG01361	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0030	CLM	AMR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG01361	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	CLM	AMR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG01361	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0038	CLM	AMR	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	HG01361	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0106	CLM	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG01361	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0272	CLM	AMR	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	HG01361	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0107	CLM	AMR	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG01361	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0233	CLM	AMR	AATF	chr17	36943954	37061871