Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG03927	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	BEB	SAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG03927	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	BEB	SAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG03927	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0278	BEB	SAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG03927	hp2	a0001	a0001c0001	a0001c0001t0026	a0001c0001t0026g0054	BEB	SAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG03927	hp1	a0001	a0001c0068	a0001c0068t0002	a0001c0068t0002g0333	BEB	SAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG03927	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0114	BEB	SAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG03927	hp1	a0001	a0001c0003	a0001c0003t0002	a0001c0003t0002g0048	BEB	SAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG03927	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0180	BEB	SAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG03927	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0035	BEB	SAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG03927	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0014	BEB	SAS	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	HG03927	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0115	BEB	SAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG03927	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0052	BEB	SAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG03927	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	BEB	SAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG03927	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	BEB	SAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG03927	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0205	BEB	SAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG03927	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0353	BEB	SAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG03927	hp1	a0002	a0002c0002	a0002c0002t0012	a0002c0002t0012g0005	BEB	SAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG03927	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0007	BEB	SAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG03927	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	BEB	SAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG03927	hp2	a0001	a0001c0012	a0001c0012t0008	a0001c0012t0008g0062	BEB	SAS	AADACL3	chr1	12711110	12733760
AADAT_chr4_170055222_170094956	HG03927	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	BEB	SAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG03927	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	BEB	SAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG03927	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0029	BEB	SAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG03927	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0016	BEB	SAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	HG03927	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0326	BEB	SAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG03927	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0248	BEB	SAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG03927	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	BEB	SAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG03927	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0021	BEB	SAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG03927	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	BEB	SAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG03927	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	BEB	SAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG03927	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	BEB	SAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG03927	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	BEB	SAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG03927	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	BEB	SAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG03927	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0247	BEB	SAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG03927	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	BEB	SAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG03927	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0048	BEB	SAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	HG03927	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0003	BEB	SAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG03927	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	BEB	SAS	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	HG03927	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0238	BEB	SAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG03927	hp2	a0001	a0001c0006	a0001c0006t0028	a0001c0006t0028g0234	BEB	SAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	HG03927	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0130	BEB	SAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG03927	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0055	BEB	SAS	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG03927	hp1	a0031	a0031c0049	a0031c0049t0001	a0031c0049t0001g0067	BEB	SAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG03927	hp2	a0001	a0001c0004	a0001c0004t0002	a0001c0004t0002g0075	BEB	SAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG03927	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0232	BEB	SAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG03927	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0035	BEB	SAS	ABAT	chr16	8669617	8789570
ABCA1_chr9_104776006_104933155	HG03927	hp1	a0003	a0003c0076	a0003c0076t0002	a0003c0076t0002g0130	BEB	SAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG03927	hp2	a0004	a0004c0008	a0004c0008t0004	a0004c0008t0004g0264	BEB	SAS	ABCA1	chr9	104776006	104933155
ABCA3_chr16_2270881_2345728	HG03927	hp1	a0007	a0007c0016	a0007c0016t0001	a0007c0016t0001g0111	BEB	SAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	HG03927	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0242	BEB	SAS	ABCA3	chr16	2270881	2345728