Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	HG02738	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0141	PJL	SAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG02738	hp2	a0001	a0001c0002	a0001c0002t0013	a0001c0002t0013g0088	PJL	SAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG02738	hp1	a0003	a0003c0010	a0003c0010t0003	a0003c0010t0003g0084	PJL	SAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG02738	hp2	a0002	a0002c0007	a0002c0007t0003	a0002c0007t0003g0322	PJL	SAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG02738	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0227	PJL	SAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG02738	hp2	a0001	a0001c0003	a0001c0003t0002	a0001c0003t0002g0073	PJL	SAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG02738	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0190	PJL	SAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG02738	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0077	PJL	SAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG02738	hp1	a0001	a0001c0011	a0001c0011t0004	a0001c0011t0004g0294	PJL	SAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG02738	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0055	PJL	SAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG02738	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0064	PJL	SAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG02738	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0055	PJL	SAS	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	HG02738	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0251	PJL	SAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG02738	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0351	PJL	SAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG02738	hp1	a0001	a0001c0001	a0001c0001t0018	a0001c0001t0018g0135	PJL	SAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02738	hp2	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0062	PJL	SAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG02738	hp1	a0005	a0005c0014	a0005c0014t0006	a0005c0014t0006g0014	PJL	SAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02738	hp2	a0003	a0003c0005	a0003c0005t0027	a0003c0005t0027g0130	PJL	SAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG02738	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0203	PJL	SAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG02738	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0146	PJL	SAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG02738	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	PJL	SAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02738	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0091	PJL	SAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG02738	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0205	PJL	SAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG02738	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	PJL	SAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG02738	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0355	PJL	SAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG02738	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0141	PJL	SAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG02738	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0261	PJL	SAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG02738	hp2	a0002	a0002c0002	a0002c0002t0008	a0002c0002t0008g0070	PJL	SAS	AAK1	chr2	69452997	69648739
AAMP_chr2_218259129_218275137	HG02738	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02738	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0038	PJL	SAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG02738	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02738	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG02738	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	PJL	SAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02738	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG02738	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0112	PJL	SAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG02738	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0226	PJL	SAS	AARS1	chr16	70247298	70294506
AARSD1_chr17_42945526_42969454	HG02738	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0152	PJL	SAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG02738	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG02738	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0004	PJL	SAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG02738	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PJL	SAS	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	HG02738	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0304	PJL	SAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG02738	hp2	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0144	PJL	SAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	HG02738	hp1	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0117	PJL	SAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG02738	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0161	PJL	SAS	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG02738	hp1	a0002	a0002c0075	a0002c0075t0001	a0002c0075t0001g0344	PJL	SAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG02738	hp2	a0002	a0002c0032	a0002c0032t0001	a0002c0032t0001g0292	PJL	SAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG02738	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0149	PJL	SAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG02738	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0097	PJL	SAS	ABAT	chr16	8669617	8789570
ABCA12_chr2_214926542_215143626	HG02738	hp1	a0001	a0001c0002	a0001c0002t0024	a0001c0002t0024g0178	PJL	SAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG02738	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0121	PJL	SAS	ABCA12	chr2	214926542	215143626