Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG01169	hp1	a0004	a0004c0005	a0004c0005t0001	a0004c0005t0001g0035	PUR	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG01169	hp2	a0005	a0005c0004	a0005c0004t0001	a0005c0004t0001g0031	PUR	AMR	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	HG01169	hp1	a0010	a0010c0020	a0010c0020t0005	a0010c0020t0005g0037	PUR	AMR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG01169	hp2	a0004	a0004c0029	a0004c0029t0004	a0004c0029t0004g0007	PUR	AMR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG01169	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0127	PUR	AMR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG01169	hp2	a0002	a0002c0010	a0002c0010t0002	a0002c0010t0002g0138	PUR	AMR	A2M	chr12	9062708	9120919
A4GALT_chr22_42687121_42725870	HG01169	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0116	PUR	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG01169	hp2	a0001	a0001c0002	a0001c0002t0012	a0001c0002t0012g0024	PUR	AMR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG01169	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0030	PUR	AMR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG01169	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0124	PUR	AMR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG01169	hp1	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0021	PUR	AMR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG01169	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0033	PUR	AMR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG01169	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0038	PUR	AMR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG01169	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	PUR	AMR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG01169	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0050	PUR	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG01169	hp2	a0001	a0001c0001	a0001c0001t0016	a0001c0001t0016g0011	PUR	AMR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG01169	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG01169	hp2	a0003	a0003c0005	a0003c0005t0007	a0003c0005t0007g0003	PUR	AMR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG01169	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0138	PUR	AMR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG01169	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0118	PUR	AMR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG01169	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0039	PUR	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG01169	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	PUR	AMR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG01169	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0034	PUR	AMR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG01169	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG01169	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0184	PUR	AMR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG01169	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0078	PUR	AMR	AAGAB	chr15	67195667	67259661
AAMP_chr2_218259129_218275137	HG01169	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0016	PUR	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG01169	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG01169	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG01169	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG01169	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0131	PUR	AMR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG01169	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0029	PUR	AMR	AAR2	chr20	36231478	36261933
AARS1_chr16_70247298_70294506	HG01169	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0067	PUR	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG01169	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0219	PUR	AMR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG01169	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG01169	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	PUR	AMR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG01169	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0099	PUR	AMR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG01169	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0053	PUR	AMR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG01169	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0024	PUR	AMR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG01169	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG01169	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0261	PUR	AMR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG01169	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0328	PUR	AMR	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG01169	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0236	PUR	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG01169	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0033	PUR	AMR	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	HG01169	hp1	a0001	a0001c0004	a0001c0004t0002	a0001c0004t0002g0012	PUR	AMR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG01169	hp2	a0009	a0009c0025	a0009c0025t0004	a0009c0025t0004g0336	PUR	AMR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG01169	hp1	a0003	a0003c0010	a0003c0010t0010	a0003c0010t0010g0342	PUR	AMR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG01169	hp2	a0001	a0001c0013	a0001c0013t0002	a0001c0013t0002g0204	PUR	AMR	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG01169	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0038	PUR	AMR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG01169	hp2	a0004	a0004c0004	a0004c0004t0003	a0004c0004t0003g0238	PUR	AMR	ABCA10	chr17	69143007	69233824