Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG01167	hp1	a0005	a0005c0004	a0005c0004t0001	a0005c0004t0001g0031	PUR	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG01167	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG01167	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0253	PUR	AMR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG01167	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0130	PUR	AMR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG01167	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0051	PUR	AMR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG01167	hp2	a0004	a0004c0029	a0004c0029t0004	a0004c0029t0004g0007	PUR	AMR	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	HG01167	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0003	PUR	AMR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG01167	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0067	PUR	AMR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG01167	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0372	PUR	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG01167	hp2	a0001	a0001c0002	a0001c0002t0012	a0001c0002t0012g0016	PUR	AMR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG01167	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	PUR	AMR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG01167	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0123	PUR	AMR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG01167	hp1	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0021	PUR	AMR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG01167	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	HG01167	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0050	PUR	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG01167	hp2	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0044	PUR	AMR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG01167	hp1	a0003	a0003c0005	a0003c0005t0007	a0003c0005t0007g0003	PUR	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG01167	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0131	PUR	AMR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG01167	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0177	PUR	AMR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG01167	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0109	PUR	AMR	AADACL4	chr1	12639085	12672076
AAGAB_chr15_67195667_67259661	HG01167	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0007	PUR	AMR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG01167	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0077	PUR	AMR	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG01167	hp1	a0001	a0001c0001	a0001c0001t0078	a0001c0001t0078g0055	PUR	AMR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG01167	hp2	a0001	a0001c0001	a0001c0001t0027	a0001c0001t0027g0128	PUR	AMR	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG01167	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0357	PUR	AMR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG01167	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0282	PUR	AMR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG01167	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0047	PUR	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG01167	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	PUR	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG01167	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG01167	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG01167	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0084	PUR	AMR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG01167	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0134	PUR	AMR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG01167	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG01167	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0003	PUR	AMR	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	HG01167	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG01167	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	PUR	AMR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG01167	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	PUR	AMR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG01167	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0052	PUR	AMR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG01167	hp1	a0001	a0001c0001	a0001c0001t0025	a0001c0001t0025g0025	PUR	AMR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG01167	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0024	PUR	AMR	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG01167	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0265	PUR	AMR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG01167	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0003	PUR	AMR	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG01167	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	PUR	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG01167	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0032	PUR	AMR	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	HG01167	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0229	PUR	AMR	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG01167	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0054	PUR	AMR	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG01167	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0329	PUR	AMR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG01167	hp2	a0009	a0009c0025	a0009c0025t0004	a0009c0025t0004g0334	PUR	AMR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG01167	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0354	PUR	AMR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG01167	hp2	a0003	a0003c0010	a0003c0010t0010	a0003c0010t0010g0344	PUR	AMR	ABAT	chr16	8669617	8789570